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[#244] Failure on CB-SE-HE bond angle in SEC

Date:
2014-12-23 13:33
Priority:
3
State:
Open
Submitted by:
Robbie Joosten (rjoosten)
Assigned to:
Nobody (None)
Summary:
Failure on CB-SE-HE bond angle in SEC

Detailed description
Running acedrg on seleno-cysteine (http://ligand-expo.rcsb.org/reports/S/SEC/SEC.cif) caused it to stop with:
//
The process stoped because of a runtime error in code 'libmol'!
See the associated log file 'SEC.cif_cod.log'.
//
The log file (attached) implied that there was no target for the CB-SE-HE bond angle in COD. Perhaps a suitable fallback value can be set.
Message  ↓
Date: 2014-12-24 00:10
Sender: Fei Long


The bug is fixed.

This bug prevents default angle values to be taken if proper COD values not found, at some cases.

New codes committed.
Fei Long

Attachments:
Size Name Date By Download
25 KiBSEC.cif_cod.log2014-12-23 13:33rjoostenSEC.cif_cod.log
Field Old Value Date By
File Added66: SEC.cif_cod.log2014-12-23 13:33rjoosten